EDUCATION & RESEARCH

Scientific & Engineering

Our Focus Areas in Scientific Engineering

Chemistry

Computational Chemistry

Sun is making great strides in providing computationalchemistry solutions. Up until recently this market was dominated by SGI,but with the growing network economy, more software vendors and chemistsare realizing the advantages of Sun's vision. Hundredsof applications run under Solaris and every application which runs on Solariswill run on any Sun product from the desktop to the largest servers; andSun is the leading partner for companies seeking to become ApplicationService Providers or who wish to deliver services over the Net.

Life Sciences

Sun now enables a full range of life science applicationsincluding AMBER, CHARMM, CNX, and MACROMODEL, as well as being one ofthe leading providers of bioinformatics software.Through a recent agreement with Molecular Simulations, Inc. their entirelife sciences suite including WebLab will soon be available on Solaris.

Materials Sciences

Sun continues our commitment to a wide variety ofab initio software packages including GAUSSIAN, Jaguar, GAMESS, Q-CHEM,MolPro, and NW Chem.

Chemical Informatics

Sun is well known for it's leadership in informationand database hosting. Daylight ChemicalInformation Systems supports Solaris on their entire software productline. The leading vendor of chemical informatics software, MDL, now fullysupports Solaris, including their core applications ISIS/Host, ChemscapeServer, and ISIS/Direct. (PressRelease)

Presentation at the HPC Meeting in Dallas
Discovery Informatics, Brian Hammond, Sun Microsoft, Inc.

Sun Solutions Catalog:
Chemistry & Molecular Modeling

Industrial Applications:
Petroleum

Partner & Solutions:

GROMOS, a solution fromour partner ETH Zuerich

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Geosciences

Geoscience can range from understanding the complete Earth system - Earth Science, Atmospheric Science, Ocean Science - to state of the art usage of GIS data in applications for our most modern wireless devices. Historically much resource has been put into pure research in numerous disciplines relating to Geoscience. During the 21st Century much of the focus of scientists and researchers will be concentrated on how to leverage the knowledge we have gained and continue to gain insight into applications benefiting our international society. Whether it be better storm prediction or more optimal use of wireless technology, international governments are investing in the practical application of our scientific knowledge. Sun's products fit into each area of current research as well as becoming the integral component driving the solutions of the next generation problems.

Sun is putting increasing investment into the ISV relationships that are central suppliers of tools and software to the Geoscience community.

Some of the more relevant areas for future Geoscience growth and development include:

  • GIS - Geographic Information Science
    • UCGIS (University Consortium for Geographic Information Science) - www.ucgis.org
    • ESRI (Environmental Systems Research Institute Inc) - www.esri.com


  • Complex System Simulation - Simulations comprised of earth science, atmospheric science, and ocean science and their relationship to global change
    • NSF (National Science Foundation) - www.nsf.gov
    • IAI (Inter-American Institute for Global Change Research) - www.iai.int
    • ENRICH (European Network for Research on Global Change)
    Sun is particularly interested in academic partnerships focusing in the area of global change and research. Several billion dollars each year are being invested worldwide in this area. Contact your local Sun representative to discuss your Sun/academic partnership in the area of global change.

  • Location Services - Usage of the GIS information in the wireless world

  • Geospatial Technologies - www.jlocationservices.com
    An excellent example of the retrieval and management of geospatial data is the CAST (Center for Advanced Spatial Technologies) at the University of Arkansas (www.cast.uark.edu). CAST is able to process and reference geospatial data with 10 minutes of its receipt from the USGS. Sun servers hosting an ORACLE database are the heart and soul of this implementation.

Oil and Gas
The traditional oil and gas industry has been studying existing data for years. With new visualization techniques and products, researchers are able to analyze data faster and more thoroughly resulting in better and more complete decision making. Watch our website for the announcement of a new Center of Excellence emphasizing oil and gas applications within the next few months.

Sun is developing a consortium of leading researchers worldwide who can expand the existing applications base as well as identifying new applications technologies. This consortium will be closely tied to industry and will be aggressively facilitating new deployment opportunities.

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Engineering

Success Stories

Industrial Applications

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Weather & Climate Modeling

The weather and climate modeling market is an internationalmarket that acquires in excess of $100M/year of computing technology.The technologies are spread throughout both academic and research institutionschartered with refining existing simulation techniques as well asapplying state of the art hardware and software technology to define thenew paradigm of simulations. The key software applications used in thisindustry include HIRLAM, MM5, and CCM. These applications utilize routinesfrom vendors such as NAG to enhance their simulations. As advancesare made in visualization techniques, they will be employed more widelyon desktop and server systems to increase the productivity of researchteams.

Customer Story
National Center for Atmospheric Research (NCAR)

Success Story
University of Washington - Atmospheric Science Department
Forecasting weather is no easy task for most computers. Extensive calculationsare required which often take up many system resources.

What does one do? They use SUN's line of Ultra computers to providethe resources needed to calculate accurate forecasts.

Partner & Solutions
University Consortium for Atmospheric Research (UCAR)

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Computational Biology

Computational Biology techniques enables life scienceresearchers to capture, organize and analyze vast amounts of data and toconvert this data into information and knowledge useful for designing improvedmedical and agricultural products and processes.

The Computational Biology segment consists ofbioinformatics (genomic (sequence) and post-genomics (gene expression,proteomics, pharmacogenomics, etc.)) data, molecular modeling/computationalchemistry applied to peptides/proteins, biological networks and simulations,and certain aspects of medical bioinformatics (clinical trial design, simulation,experimentation, from a research perspective as opposed to a "production"perspective).

Computational Biology Literature
Briefing in Computational Biology
Computational Applications for Life Sciences on Sun Platforms

Success Stories in Computational Biology
Expanding the Boundaries in Bioinformatics

CB-SIG Presentations at the CCPGA2 Meeting in Durham

Presentations at the HPC Meeting in Denver

Presentations at the HPC Meeting in Heidelberg

Presentations at the HPC Meeting in Dallas

Sun's Solutions Catalog
Biotechnology & Biomedical Sciences

Partners
GeneticXchange data integration middleware
LASSAP, a solution from our partner INRIA
TimeLogic

Centers of Excellence

Computational Biology Special Interest Group

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Computational Finance

The world's economy has become a matrix of interdependentinfluences that now affect even the simplest of financial transactionsand events. Sun is deploying its' broad product line into the hands ofresearchers worldwide who are experimenting and discovering new and moderntechniques for financial modeling, risk analysis, equity trading methods,as well as new, untested methods of simulation. Sun's goal is the developmentof a worldwide consortium of leading research institutions working closelywith the industrial community to enhance existing financial models anddevelop new, state of the art models that will allow industry to betterrun their businesses towards profitable goals.

Researchers will be using Sun hardware and softwaretechnologies in concert with applications technologies from ISV's suchas Informix and NAG to develop and implement the new simulation techniques.Use of current and future hardware with newly developed applicationstechnologies will allow the researchers to simulate phenomena heretoforethought untouchable as well as analyze ongoing financial transactions inthe most timely manner ever conceived.

Stay tuned to our computational finance website aswe continue to build our worldwide research team of partners. Let us knowyour thoughts and desires for enhancements.

Sun'sIndustrial Applications:
Finance & Business Analysis

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HPC Environments (Grid Computing)

Computing Infrastructure and High Performance ComputingEnvironments (HPCE)

Sun's vision for Scientific and Engineering computingis to provide a seamless, integrated environment from desktop to TeraFLOPSfor both floating point and data intensive computing. Sun's emphasis ison providing the highest level of sustained performance, not just the biggest"peak theoretical" GFLOPS-TFLOPS. This is accomplished by a combinationof hardware and software reliability, availability, and serviceability (RAS),and providing high quality tools and software.

Scientific and Engineering computing and HPC rely heavilyon programming and performance tools and work load and storage managementsystems. The complete HPCE can include all the following:

  • Parallel Programming languages, libraries, debugging,and performance tools;
  • Queuing systems;
  • Load scheduling and monitoring facilities;
  • Accounting tools;
  • System performance monitors;
  • System management tools;
  • I/O and network performance and management tools;
  • High performance file systems;
  • Hierarchical storage management facilities;
  • Operating systems (OS) for each node;
  • Clustering tools and Grid OS;
  • Security software;
  • Portal tool sets, Web interfaces.

Sun has strategic investments and partnershipsin all these areas such as:

  • both thin and fat node SMPs programming;
  • FORTE™ programming environment;
  • GridEngine™ job management environment;
  • Support for PBS, LSF and others;
  • High performance RAID storage arrays;
  • VERITAS and LSC, Inc. file systems and storage managementtools;
  • Sun Management Center™;
  • JIRO™ initiative;
  • "Full Moon"™ high availability clustering;
  • HPC™ Cluster tools;
  • HPC Professional services;
  • Storage Area Networks;
  • High-speed interconnects including ATM, Gigabit Ethernet,Myrinet, HiPPI, and GSN;
  • iPlanet.

Grid Computing at Sun Microsystems, Inc.

Grid ComputingHomepage with Grid Engine 5.3 Software (free download)

SunTREC: HPC Grid

Poweringthe Scientific Community via the HPC Grid, Joerg Schwarz, Sun Microsystems,Inc.

Presentations at the HPC Meeting in Dallas

Success Stories

Sun' s HPC Initiative

HPC Cluster Tools

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Computer Science

Computer Science is the discipline that underlies muchof the information technology revolution, from computer languages (e.g.JAVA), Operating Systems (e.g., SOLARIS), Hardware Components and SystemsDesign (e.g., SPARC, E10000), and Networks (e.g., Sun GigabitEthernet).

Forte HPCTools

Presentations at the last two HPC Meetings 2000

Storage presentations at the HPC Meeting in Mannheim

Sun moves to DOTCOM-HighPerformance Computing

Visualization

Success Stories

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Mathematics

Mathematics is a basic enabling discipline that underliesmuch of science and engineering (as well as business). Sun isparticularly interested in the applications of IntervalArithmetic, which is now supported by Sun in several FORTEcompilers and is starting to be supported in hardware,as well.

IntervalArithmetic

Presentations at the HPC Meeting in Dallas

Partner & Solutions

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Physics

Physics encompasses a wide variety of computationalsciences. The most high-profile national research projects are in high-energyphysics (HEP), with other disciplinessuch as astronomy being smaller.

HEP can be divided into two branches:
first principles calculations such as quantum electrodynamics(QED) and quantum chromodynamics (QCD) which require far more computationalresources than are available anywhere - because of this these applicationstend to foster the creation of large "home made" supercomputers; reduction of experimental data from particle beam experiments - HEP experiments produce huge amounts of raw data which need to be stored in a database and processed by the scientists typically using applications written by the scientist. This is the purpose of the E10000and very large farm of Netra-T1s at SLAC.

HEP is highly concentrated in countries which can affordlarge HEP facilities such as CERN, SLAC, and Fermilab. Sun's role in the physics market is in network computing(grid computing), providing servers for large memory simulations, and large-scalefile services.

Sun's Solutions Catalog: Power Systems (Fossil,Hydro,Nuclear)

Industrial Applications: Petroleum

Success Story

  • Extendinglimits of magnetic recording -- June 2000
    UC San Diego scientists, in collaboration with San Diego SupercomputerCenter staff, are using a Sun HPC 10000 to exploremodels of computer disks to determine the thermal stability limitsfor ultrahigh-density systems with extremely fine grains.

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